- #Installation of package dplyr had nonzero exit status how to
- #Installation of package dplyr had nonzero exit status install
G++ -std=gnu++11 -I"/usr/share/R/include" -DNDEBUG -I"/home/me/R/x86_64-pc-linux-gnu-library/3.5/Rcpp/include" -I./inst/include -fopenmp -fpic -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -c RcppArmadillo.cpp -o RcppArmadillo.o found and suitableĬonfig.status: creating inst/include/RcppArmadilloConfigGenerated.h yes, with OpenMP as version 5.4.0Ĭhecking for macOS. (cached) yesĬhecking whether g++ version is sufficient. (cached) yesĬhecking whether g++ accepts -g. g++ -EĬhecking whether we are using the GNU C++ compiler.
#Installation of package dplyr had nonzero exit status how to
yesĬhecking how to run the C++ preprocessor. noĬhecking whether we are using the GNU C++ compiler. a.outĬhecking whether we are cross compiling. yesĬhecking for C++ compiler default output file name. ** package ‘RcppArmadillo’ correctement décompressé et sommes MD5 vérifiéesĬhecking whether the C++ compiler works. * installing *source* package ‘RcppArmadillo’. > BiocManager::install("DESeq2", version = "3.8")īioconductor version 3.8 (BiocManager 1.30.4), R 3.5.2 ()Īlso installing the dependency ‘RcppArmadillo’Ĭontent type 'application/x-gzip' length 1333647 bytes (1.3 MB)Ĭontent type 'application/x-gzip' length 2062838 bytes (2.0 MB) Here are the DESEq2 installation errors: > if (!requireNamespace("BiocManager", quietly = TRUE)) I have read many posts and tried the different tips across, but none have worked so far.
#Installation of package dplyr had nonzero exit status install
Here's the most problematic-looking part of RStudio's response when I install.I am facing problems to install the DESeq2 package on my linux laptop. I've tried to install tidyselect separately too and that doesn't seem to work. Package ‘dplyr’ was built under R version 3.5.3 ‘C:\Users\spenc\AppData\Local\Temp\RtmpEfFctA\downloaded_packages’Įrror: package or namespace load failed for ‘dplyr’ in loadNamespace(j <- i], c(lib.loc. Installation of package ‘modelr’ had non-zero exit status * removing 'C:/Users/spenc/Documents/R/win-library/3.5/modelr' Installation of package ‘tidyselect’ had non-zero exit statusĮRROR: dependency 'tidyselect' is not available for package 'modelr'
* removing 'C:/Users/spenc/Documents/R/win-library/3.5/tidyselect' Namespace 'rlang' 0.4.5 is being loaded, but >= 0.4.6 is requiredĮRROR: lazy loading failed for package 'tidyselect' ** byte-compile and prepare package for lazy loadingĮrror in loadNamespace(i, c(lib.loc. ** package 'tidyselect' successfully unpacked and MD5 sums checked * installing *source* package 'tidyselect'. Installing the source packages ‘tidyselect’, ‘modelr’Ĭontent type 'application/x-gzip' length 90842 bytes (88 KB)Ĭontent type 'application/x-gzip' length 121333 bytes (118 KB) Package ‘tidyverse’ successfully unpacked and MD5 sums checkedĬ:\Users\spenc\AppData\Local\Temp\RtmpEfFctA\downloaded_packages Package ‘rlang’ successfully unpacked and MD5 sums checked There are binary versions available but the source versions are later:Ĭontent type 'application/zip' length 1115838 bytes (1.1 MB)Ĭontent type 'application/zip' length 439648 bytes (429 KB) Installing package into ‘C:/Users/spenc/Documents/R/win-library/3.5’Īlso installing the dependencies ‘tidyselect’, ‘modelr’, ‘rlang’
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